Hvulgare HORVU2Hr1G109710

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Hvulgare_HORVU2Hr1G109710
[ HORVU2Hr1G109710]
chr2H 717723852 717727769 r1 Hordeum vulgare (Phytozome 13)
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Hvulgare_HORVU2Hr1G109710.3
HORVU2Hr1G109710.3
High No 741 OG0039897
Coding potential...
Type: noncoding Potential: -0.916
Folding energies...
MFEI: -27.490 AMFE: -0.651
GC content
%: 42.240
Hvulgare_HORVU2Hr1G109710.5
HORVU2Hr1G109710.5
High No 383 OG0192579
Coding potential...
Type: noncoding Potential: -0.704
Folding energies...
MFEI: -26.590 AMFE: -0.387
GC content
%: 68.668


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Hvulgare_HORVU2Hr1G109710.png