Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU2Hr1G110600 [ HORVU2Hr1G110600] |
chr2H | 720345804 | 720348641 | r1 | Hordeum vulgare (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU2Hr1G110600.10 HORVU2Hr1G110600.10 |
High | No | 680 | OG0002128 | Get ORF Coding potential... Type: noncoding Potential: -0.862 Folding energies... MFEI: -29.706 AMFE: -0.608 GC content %: 48.824 | |
Hvulgare_HORVU2Hr1G110600.4 HORVU2Hr1G110600.4 |
High | No | 968 | OG0002128 | Get ORF Coding potential... Type: noncoding Potential: -0.453 Folding energies... MFEI: -33.822 AMFE: -0.626 GC content %: 54.029 | |
Hvulgare_HORVU2Hr1G110600.7 HORVU2Hr1G110600.7 |
High | No | 821 | OG0002128 | Get ORF Coding potential... Type: noncoding Potential: -0.702 Folding energies... MFEI: -28.538 AMFE: -0.592 GC content %: 48.234 | |
Hvulgare_HORVU2Hr1G110600.8 HORVU2Hr1G110600.8 |
High | No | 834 | OG0002128 | Get ORF Coding potential... Type: noncoding Potential: -0.785 Folding energies... MFEI: -28.885 AMFE: -0.608 GC content %: 47.482 | |
Hvulgare_HORVU2Hr1G110600.9 HORVU2Hr1G110600.9 |
High | No | 703 | OG0002128 | Get ORF Coding potential... Type: noncoding Potential: -0.812 Folding energies... MFEI: -29.858 AMFE: -0.616 GC content %: 48.506 |