Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU3Hr1G075750 [ HORVU3Hr1G075750] |
chr3H | 565667900 | 565673358 | r1 | Hordeum vulgare (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU3Hr1G075750.1 HORVU3Hr1G075750.1 |
High | No | 1031 | OG0041662 | Get ORF Coding potential... Type: noncoding Potential: -0.185 Folding energies... MFEI: -27.662 AMFE: -0.638 GC content %: 43.356 | |
Hvulgare_HORVU3Hr1G075750.21 HORVU3Hr1G075750.21 |
High | No | 533 | OG0041663 | Get ORF Coding potential... Type: noncoding Potential: -1.011 Folding energies... MFEI: -26.135 AMFE: -0.633 GC content %: 41.276 | |
Hvulgare_HORVU3Hr1G075750.7 HORVU3Hr1G075750.7 |
High | No | 1396 | OG0041664 | Get ORF Coding potential... Type: noncoding Potential: -0.152 Folding energies... MFEI: -27.307 AMFE: -0.655 GC content %: 41.691 |