Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU6Hr1G052810 [ HORVU6Hr1G052810] |
chr6H | 325650100 | 325653250 | r1 | Hordeum vulgare (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU6Hr1G052810.11 HORVU6Hr1G052810.11 |
High | No | 694 | OG0047322 | Get ORF Coding potential... Type: noncoding Potential: -0.910 Folding energies... MFEI: -31.484 AMFE: -0.589 GC content %: 53.458 | |
Hvulgare_HORVU6Hr1G052810.12 HORVU6Hr1G052810.12 |
High | No | 849 | OG0047323 | Get ORF Coding potential... Type: noncoding Potential: -0.936 Folding energies... MFEI: -32.014 AMFE: -0.603 GC content %: 53.121 | |
Hvulgare_HORVU6Hr1G052810.3 HORVU6Hr1G052810.3 |
High | No | 1436 | OG0047324 | Get ORF Coding potential... Type: noncoding Potential: -0.151 Folding energies... MFEI: -35.056 AMFE: -0.661 GC content %: 53.064 |