Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU7Hr1G021810 [ HORVU7Hr1G021810] |
chr7H | 31350659 | 31352364 | r1 | Hordeum vulgare (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU7Hr1G021810.1 HORVU7Hr1G021810.1 |
Low | No | 694 | OG0048477 | Get ORF Coding potential... Type: coding Potential: 0.106 Folding energies... MFEI: -39.971 AMFE: -0.667 GC content %: 59.942 | |
Hvulgare_HORVU7Hr1G021810.3 HORVU7Hr1G021810.3 |
High | No | 347 | OG0048478 | Get ORF Coding potential... Type: noncoding Potential: -0.258 Folding energies... MFEI: -44.870 AMFE: -0.651 GC content %: 68.876 |