Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU7Hr1G079530 [ HORVU7Hr1G079530] |
chr7H | 469387062 | 469392630 | r1 | Hordeum vulgare (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU7Hr1G079530.1 HORVU7Hr1G079530.1 |
High | No | 731 | OG0049642 | Get ORF Coding potential... Type: noncoding Potential: -0.694 Folding energies... MFEI: -28.085 AMFE: -0.547 GC content %: 51.300 | |
Hvulgare_HORVU7Hr1G079530.2 HORVU7Hr1G079530.2 |
High | No | 281 | OG0193314 | Get ORF Coding potential... Type: noncoding Potential: -0.865 Folding energies... MFEI: -21.744 AMFE: -0.536 GC content %: 40.569 | |
Hvulgare_HORVU7Hr1G079530.4 HORVU7Hr1G079530.4 |
High | No | 276 | OG0003363 | Get ORF Coding potential... Type: noncoding Potential: -0.900 Folding energies... MFEI: -23.696 AMFE: -0.467 GC content %: 50.725 |