Jregia Jr01 22670

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Jregia_Jr01_22670
[ Jr01_22670]
1 26826813 26828149 v2 Juglans regia (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Jregia_Jr01_22670_p1
Jr01_22670_p1
Low No 1095 OG0193407
Coding potential...
Type: coding Potential: 0.408
Folding energies...
MFEI: -26.566 AMFE: -0.556
GC content
%: 47.763


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Jregia_Jr01_22670.png