Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Jregia_Jr02_06650 [ Jr02_06650] |
2 | 8045365 | 8048606 | v2 | Juglans regia (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Jregia_Jr02_06650_p1 Jr02_06650_p1 |
Low | No | 1725 | OG0193432 | Get ORF Coding potential... Type: noncoding Potential: -0.920 Folding energies... MFEI: -28.400 AMFE: -0.631 GC content %: 44.986 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Jregia_Jr02_06650_p1 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia |