Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Jregia_Jr02_08130 [ Jr02_08130] |
2 | 10591218 | 10592924 | v2 | Juglans regia (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Jregia_Jr02_08130_p1 Jr02_08130_p1 |
Low | No | 327 | OG0193435 | Get ORF Coding potential... Type: noncoding Potential: -0.327 Folding energies... MFEI: -27.523 AMFE: -0.625 GC content %: 44.037 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Jregia_Jr02_08130_p1 | RepBase (RepeatMasker) | 2014-01-31 | LINE/L1 |