Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Jregia_Jr02_11400 [ Jr02_11400] |
2 | 21363059 | 21363692 | v2 | Juglans regia (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Jregia_Jr02_11400_p1 Jr02_11400_p1 |
Low | No | 634 | OG0193447 | Get ORF Coding potential... Type: noncoding Potential: -0.106 Folding energies... MFEI: -25.205 AMFE: -0.650 GC content %: 38.801 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Jregia_Jr02_11400_p1 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia |