Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Jregia_Jr12_11210 [ Jr12_11210] |
12 | 20733665 | 20734100 | v2 | Juglans regia (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Jregia_Jr12_11210_p1 Jr12_11210_p1 |
Low | No | 336 | OG0193805 | Get ORF Coding potential... Type: noncoding Potential: -0.200 Folding energies... MFEI: -24.107 AMFE: -0.698 GC content %: 34.524 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Jregia_Jr12_11210_p1 | RepBase (RepeatMasker) | 2014-01-31 | LINE/L1 | |
Jregia_Jr12_11210_p1 | SwissProt | 2021-04-01 | O00370 | 3.04e-5 |