Jregia Jr Scaffold 120 00040

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Jregia_Jr_Scaffold_120_00040
[ Jr_Scaffold_120_00040]
LIHL02000135.1 30692 31819 v2 Juglans regia (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Jregia_Jr_Scaffold_120_00040_p1
Jr_Scaffold_120_00040_p1
High No 360 OG0193923
Coding potential...
Type: noncoding Potential: -0.903
Folding energies...
MFEI: -21.917 AMFE: -0.530
GC content
%: 41.389


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Jregia_Jr_Scaffold_120_00040.png