Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Kfedtschenkoi_Kaladp1314s0021 [ Kaladp1314s0021] |
Scaffold_1314 | 164076 | 165791 | v1.1 | Kalanchoe fedtschenkoi (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Kfedtschenkoi_Kaladp1314s0021.1 Kaladp1314s0021.1 |
High | No | 502 | OG0196677 | Get ORF Coding potential... Type: noncoding Potential: -0.577 Folding energies... MFEI: -19.781 AMFE: -0.517 GC content %: 38.247 | |
Kfedtschenkoi_Kaladp1314s0021.2 Kaladp1314s0021.2 |
High | No | 598 | OG0196678 | Get ORF Coding potential... Type: noncoding Potential: -1.008 Folding energies... MFEI: -17.692 AMFE: -0.470 GC content %: 37.625 | |
Kfedtschenkoi_Kaladp1314s0021.3 Kaladp1314s0021.3 |
High | No | 352 | OG0196679 | Get ORF Coding potential... Type: noncoding Potential: -0.860 Folding energies... MFEI: -19.375 AMFE: -0.418 GC content %: 46.307 |