Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Lalbus_Lalb_Chr00c06g0404581 [ Lalb_Chr00c06g0404581] |
Lalb_Chr00c06 | 382216 | 382634 | v1 | Lupinus albus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Lalbus_Lalb_Chr00c06g0404581 Lalb_Chr00c06g0404581 |
Low | No | 419 | OG0205755 | Get ORF Coding potential... Type: noncoding Potential: -1.374 Folding energies... MFEI: -36.301 AMFE: -0.850 GC content %: 42.721 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lalbus_Lalb_Chr00c06g0404581 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia |