Lalbus Lalb Chr00c21g0405481

From GreeNC


Gene information
Help.png

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Lalbus_Lalb_Chr00c21g0405481
[ Lalb_Chr00c21g0405481]
Lalb_Chr00c21 83384 83706 v1 Lupinus albus (Phytozome 13)
Coding?
No


Transcript features
Help.png

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Lalbus_Lalb_Chr00c21g0405481
Lalb_Chr00c21g0405481
High No 323 OG0205761
Coding potential...
Type: noncoding Potential: -0.984
Folding energies...
MFEI: -22.786 AMFE: -0.529
GC content
%: 43.034


Gene models
Help.png

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Lalbus_Lalb_Chr00c21g0405481.png