Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Lalbus_Lalb_Chr02g0153101 [ Lalb_Chr02g0153101] |
Lalb_Chr02 | 8276107 | 8278771 | v1 | Lupinus albus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Lalbus_Lalb_Chr02g0153101 Lalb_Chr02g0153101 |
Low | No | 2305 | OG0002657 | Get ORF Coding potential... Type: noncoding Potential: -0.257 Folding energies... MFEI: -24.307 AMFE: -0.635 GC content %: 38.265 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lalbus_Lalb_Chr02g0153101 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia |