Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Lalbus_Lalb_Chr05g0215191 [ Lalb_Chr05g0215191] |
Lalb_Chr05 | 2350834 | 2351638 | v1 | Lupinus albus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Lalbus_Lalb_Chr05g0215191 Lalb_Chr05g0215191 |
Low | No | 805 | OG0206733 | Get ORF Coding potential... Type: noncoding Potential: -1.181 Folding energies... MFEI: -25.578 AMFE: -0.705 GC content %: 36.273 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lalbus_Lalb_Chr05g0215191 | SwissProt | 2021-04-01 | Q3EBM6 | 4.0e-4 |
Lalbus_Lalb_Chr05g0215191 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Pao |