Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Lalbus_Lalb_Chr19g0132261 [ Lalb_Chr19g0132261] |
Lalb_Chr19 | 13565900 | 13571298 | v1 | Lupinus albus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Lalbus_Lalb_Chr19g0132261 Lalb_Chr19g0132261 |
Low | No | 1530 | OG0209231 | Get ORF Coding potential... Type: noncoding Potential: -1.076 Folding energies... MFEI: -22.889 AMFE: -0.652 GC content %: 35.098 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lalbus_Lalb_Chr19g0132261 | SwissProt | 2021-04-01 | Q9SIW2 | 1.15e-10 |
Lalbus_Lalb_Chr19g0132261 | RepBase (RepeatMasker) | 2014-01-31 | LTR/ERV1 |