Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Langustifolius_TanjilG_28275 [ TanjilG_28275] |
Scaffold_644 | 20405 | 20620 | v1 | Lupinus angustifolius (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Langustifolius_OIW21995 OIW21995 |
Low | Yes | 216 | [1] | Get ORF Coding potential... Type: noncoding Potential: -0.679 Folding energies... MFEI: -24.769 AMFE: -0.669 GC content %: 37.037 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Langustifolius_OIW21995 | Rfam | 14.6 | MIR2118 | 0.0055 |
Langustifolius_OIW21995 | RepBase (RepeatMasker) | 0000-00-00 | LTR/Copia |