Lperrieri LPERR01G00840

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Lperrieri_LPERR01G00840
[ LPERR01G00840]
1 515478 531140 v1.4 Leersia perrieri (Ensembl Plants 51)
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Lperrieri_LPERR01G00840.3
LPERR01G00840.3
High No 351 OG0201262
Coding potential...
Type: noncoding Potential: -0.908
Folding energies...
MFEI: -35.698 AMFE: -0.623
GC content
%: 57.265


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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