Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Lperrieri_LPERR05G13970 [ LPERR05G13970] |
5 | 13653229 | 13658078 | v1.4 | Leersia perrieri (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Lperrieri_LPERR05G13970.1 LPERR05G13970.1 |
High | No | 1168 | OG0013467 | Get ORF Coding potential... Type: noncoding Potential: -0.916 Folding energies... MFEI: -30.719 AMFE: -0.606 GC content %: 50.685 | |
Lperrieri_LPERR05G13970.2 LPERR05G13970.2 |
High | No | 519 | OG0013467 | Get ORF Coding potential... Type: noncoding Potential: -0.824 Folding energies... MFEI: -31.445 AMFE: -0.508 GC content %: 61.850 | |
Lperrieri_LPERR05G13970.3 LPERR05G13970.3 |
High | No | 1123 | OG0013467 | Get ORF Coding potential... Type: noncoding Potential: -0.910 Folding energies... MFEI: -30.766 AMFE: -0.604 GC content %: 50.935 | |
Lperrieri_LPERR05G13970.4 LPERR05G13970.4 |
High | No | 474 | OG0013467 | Get ORF Coding potential... Type: noncoding Potential: -1.067 Folding energies... MFEI: -32.616 AMFE: -0.515 GC content %: 63.291 |