Macuminata Ma01 g01300

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Macuminata_Ma01_g01300
[ Ma01_g01300]
CAJGYN010000001.1 929849 930061 v2 Musa acuminata (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Macuminata_Ma01_t01300.1
Ma01_t01300.1
High No 213 OG0224687
Coding potential...
Type: noncoding Potential: -0.762
Folding energies...
MFEI: -16.197 AMFE: -0.473
GC content
%: 34.272


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Macuminata_Ma01_g01300.png