Mesculenta Manes.07G039735

From GreeNC


Gene information
Help.png

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Mesculenta_Manes.07G039735
[ Manes.07G039735]
Chromosome07 4283003 4283606 v8.1 Manihot esculenta (Phytozome 13)
Coding?
No


Transcript features
Help.png

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Mesculenta_Manes.07G039735.1
Manes.07G039735.1
High No 604 OG0051410
Coding potential...
Type: noncoding Potential: -0.518
Folding energies...
MFEI: -17.914 AMFE: -0.442
GC content
%: 40.563


Gene models
Help.png

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Mesculenta_Manes.07G039735.png