Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Mtruncatula_MTR_0001s0380 [ MTR_0001s0380] |
scaffold0001 | 158433 | 159000 | v4 | Medicago truncatula (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Mtruncatula_KEH17757 KEH17757 |
Low | No | 204 | OG0220664 | Get ORF Coding potential... Type: noncoding Potential: -0.788 Folding energies... MFEI: -22.451 AMFE: -0.515 GC content %: 43.627 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mtruncatula_KEH17757 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |