Mtruncatula MTR 3g026070

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Mtruncatula_MTR_3g026070
[ MTR_3g026070]
3 7982903 7983388 v4 Medicago truncatula (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Mtruncatula_AES69262
AES69262
High No 201 OG0217262
Coding potential...
Type: noncoding Potential: -0.842
Folding energies...
MFEI: -22.836 AMFE: -0.675
GC content
%: 33.831
Mtruncatula_KEH33158
KEH33158
High No 394 OG0223003
Coding potential...
Type: noncoding Potential: -1.335
Folding energies...
MFEI: -21.244 AMFE: -0.703
GC content
%: 30.203


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Mtruncatula_MTR_3g026070.png