Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Mtruncatula_MTR_3g067500 [ MTR_3g067500] |
3 | 30079363 | 30082045 | v4 | Medicago truncatula (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Mtruncatula_KEH34652 KEH34652 |
Low | No | 2683 | OG0223263 | Get ORF Coding potential... Type: noncoding Potential: -0.050 Folding energies... MFEI: -19.430 AMFE: -0.715 GC content %: 27.171 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mtruncatula_KEH34652 | RepBase (RepeatMasker) | 2014-01-31 | DNA/TcMar-Stowaway | |
Mtruncatula_KEH34652 | SwissProt | 2021-04-01 | Q9ZQX0 | 4.35e-15 |