Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Mtruncatula_MTR_4g040440 [ MTR_4g040440] |
4 | 14499454 | 14502895 | v4 | Medicago truncatula (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Mtruncatula_KEH29516 KEH29516 |
Low | No | 300 | OG0001219 | Get ORF Coding potential... Type: noncoding Potential: -0.891 Folding energies... MFEI: -22.400 AMFE: -0.505 GC content %: 44.333 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mtruncatula_KEH29516 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |