Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Nattenuata_A4A49_42767 [ A4A49_42767] |
scaffold12096 | 3257 | 3935 | r2 | Nicotiana attenuata (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Nattenuata_OIT19009 OIT19009 |
Low | No | 679 | OG0227723 | Get ORF Coding potential... Type: noncoding Potential: -0.469 Folding energies... MFEI: -23.166 AMFE: -0.594 GC content %: 39.028 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Nattenuata_OIT19009 | SwissProt | 2021-04-01 | Q6NN02 | 9.17e-12 |