Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Nattenuata_A4A49_59504 [ A4A49_59504] |
scaffold23167 | 1 | 204 | r2 | Nicotiana attenuata (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Nattenuata_OIT08977 OIT08977 |
Low | No | 204 | OG0002187 | Get ORF Coding potential... Type: noncoding Potential: -1.040 Folding energies... MFEI: -23.922 AMFE: -0.530 GC content %: 45.098 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Nattenuata_OIT08977 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |