Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Nattenuata_A4A49_64594 [ A4A49_64594] |
scaffold35623 | 859 | 1089 | r2 | Nicotiana attenuata (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Nattenuata_OIT08794 OIT08794 |
Low | No | 231 | OG0002187 | Get ORF Coding potential... Type: noncoding Potential: -0.579 Folding energies... MFEI: -22.381 AMFE: -0.497 GC content %: 45.022 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Nattenuata_OIT08794 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |