Obarthii OBART06G15960

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Obarthii_OBART06G15960
[ OBART06G15960]
6 14713698 14715352 v1 Oryza barthii (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Obarthii_OBART06G15960.1
OBART06G15960.1
High No 381 OG0241536
Coding potential...
Type: noncoding Potential: -0.804
Folding energies...
MFEI: -40.787 AMFE: -0.703
GC content
%: 58.005


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Obarthii_OBART06G15960.png