Obrachyantha OB0038G10070

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Obrachyantha_OB0038G10070
[ OB0038G10070]
super0038 132650 132862 v1.4b Oryza brachyantha (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Obrachyantha_OB0038G10070.1
OB0038G10070.1
High No 213 OG0242977
Coding potential...
Type: noncoding Potential: -0.495
Folding energies...
MFEI: -17.089 AMFE: -0.364
GC content
%: 46.948


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Obrachyantha_OB0038G10070.png