Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Olongistaminata_AMDW01013662.1_FG001 [ AMDW01013662.1_FG001] |
AMDW01013662.1 | 12 | 239 | v1 | Oryza longistaminata (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Olongistaminata_AMDW01013662.1_FGT001 AMDW01013662.1_FGT001 |
Low | No | 228 | OG0020736 | Get ORF Coding potential... Type: noncoding Potential: -0.282 Folding energies... MFEI: -39.737 AMFE: -0.573 GC content %: 69.298 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Olongistaminata_AMDW01013662.1_FGT001 | SwissProt | 2021-04-01 | Q08473 | 5.5e-4 |