Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Omeridionalis_OMERI07G11540 [ OMERI07G11540] |
7 | 14474137 | 14479092 | v1.3 | Oryza meridionalis (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Omeridionalis_OMERI07G11540.1 OMERI07G11540.1 |
High | No | 835 | OG0014161 | Get ORF Coding potential... Type: noncoding Potential: -0.760 Folding energies... MFEI: -29.246 AMFE: -0.513 GC content %: 57.006 | |
Omeridionalis_OMERI07G11540.2 OMERI07G11540.2 |
High | No | 778 | OG0014161 | Get ORF Coding potential... Type: noncoding Potential: -0.774 Folding energies... MFEI: -30.514 AMFE: -0.525 GC content %: 58.098 | |
Omeridionalis_OMERI07G11540.3 OMERI07G11540.3 |
High | No | 225 | OG0014161 | Get ORF Coding potential... Type: noncoding Potential: -0.682 Folding energies... MFEI: -21.911 AMFE: -0.440 GC content %: 49.778 | |
Omeridionalis_OMERI07G11540.4 OMERI07G11540.4 |
High | No | 240 | OG0014161 | Get ORF Coding potential... Type: noncoding Potential: -0.487 Folding energies... MFEI: -19.292 AMFE: -0.526 GC content %: 36.667 |