Opunctata ENSRNA049485012

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Opunctata_ENSRNA049485012
[ ENSRNA049485012]
7 4208142 4208489 v1.2 Oryza punctata (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Opunctata_ENSRNA049485012-T1
ENSRNA049485012-T1
High No 348 OG0262525
Coding potential...
Type: noncoding Potential: -1.289
Folding energies...
MFEI: -33.506 AMFE: -0.634
GC content
%: 52.874


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Opunctata_ENSRNA049485012.png