Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Othomaeum_Oropetium_20150105_02621 [ Oropetium_20150105_02621] |
Oropetium_genomic_20141112_004 | 745239 | 748682 | v1 | Oropetium thomaeum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Othomaeum_Oropetium_20150105_02621A Oropetium_20150105_02621A |
Low | No | 634 | OG0236345 | Get ORF Coding potential... Type: noncoding Potential: -0.736 Folding energies... MFEI: -28.785 AMFE: -0.587 GC content %: 49.054 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Othomaeum_Oropetium_20150105_02621A | RepBase (RepeatMasker) | 2014-01-31 | Unknown |