Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Pdulcis_Prudul26ncB000031 [ Prudul26ncB000031] |
pdulcis26_s0001 | 1156458 | 1164486 | v2 | Prunus dulcis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Pdulcis_EPlT00050798294 EPlT00050798294 |
Low | No | 8029 | OG0057170 | Get ORF Coding potential... Type: noncoding Potential: -0.564 Folding energies... MFEI: -32.745 AMFE: -0.743 GC content %: 44.065 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Pdulcis_EPlT00050798294 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |