Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Pdulcis_Prudul26ncB001752 [ Prudul26ncB001752] |
pdulcis26_s0043 | 271072 | 273395 | v2 | Prunus dulcis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Pdulcis_EPlT00050814418 EPlT00050814418 |
Low | Yes | 2324 | OG0298855 | Get ORF Coding potential... Type: noncoding Potential: -1.137 Folding energies... MFEI: -27.214 AMFE: -0.724 GC content %: 37.608 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Pdulcis_EPlT00050814418 | RepBase (RepeatMasker) | 2014-01-31 | DNA; LINE/L1 | |
Pdulcis_EPlT00050814418 | Rfam | 14.6 | MIR530 | 0.0021 |