Pdulcis Prudul26ncB004993

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Pdulcis_Prudul26ncB004993
[ Prudul26ncB004993]
pdulcis26_s0382 94526 94816 v2 Prunus dulcis (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Pdulcis_EPlT00050856990
EPlT00050856990
High No 291 OG0299803
Coding potential...
Type: noncoding Potential: -1.004
Folding energies...
MFEI: -21.375 AMFE: -0.610
GC content
%: 35.052


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Pdulcis_Prudul26ncB004993.png