Psomniferum C5167 000132

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Psomniferum_C5167_000132
[ C5167_000132]
9 3806182 3809987 v1 Papaver somniferum (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Psomniferum_RZC75852
RZC75852
High No 837 OG0286833
Coding potential...
Type: noncoding Potential: -0.810
Folding energies...
MFEI: -23.692 AMFE: -0.684
GC content
%: 34.648


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Psomniferum_C5167_000132.png