Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Psomniferum_C5167_008630 [ C5167_008630] |
6 | 25012895 | 25016932 | v1 | Papaver somniferum (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Psomniferum_RZC64938 RZC64938 |
Low | No | 2250 | OG0285611 | Get ORF Coding potential... Type: noncoding Potential: -0.862 Folding energies... MFEI: -23.929 AMFE: -0.660 GC content %: 36.267 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Psomniferum_RZC64938 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia | |
Psomniferum_RZC64938 | SwissProt | 2021-04-01 | Q7DMA9 | 5.53e-4 |