Pvera EVM0000102

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Pvera_EVM0000102
[ EVM0000102]
Contig1060 514126 514764 v2 Pistacia vera (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Pvera_EVM0000102.1
EVM0000102.1
High No 300 OG0287833
Coding potential...
Type: noncoding Potential: -0.389
Folding energies...
MFEI: -23.067 AMFE: -0.563
GC content
%: 41.000


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Pvera_EVM0000102.png