Pvera EVM0002422

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Pvera_EVM0002422
[ EVM0002422]
Contig393 215530 216856 v2 Pistacia vera (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Pvera_EVM0002422.1
EVM0002422.1
High No 312 OG0287902
Coding potential...
Type: noncoding Potential: -0.053
Folding energies...
MFEI: -21.955 AMFE: -0.596
GC content
%: 36.859


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Pvera_EVM0002422.png