Pvirgatum Pavir.7NG367200

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Pvirgatum_Pavir.7NG367200
[ Pavir.7NG367200]
Chr07N 46620535 46621117 v5.1 Panicum virgatum (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Pvirgatum_Pavir.7NG367200.1
Pavir.7NG367200.1
High No 280 OG0281340
Coding potential...
Type: noncoding Potential: -1.040
Folding energies...
MFEI: -22.500 AMFE: -0.496
GC content
%: 45.357


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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