Qlobata QL06p046039

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Qlobata_QL06p046039
[ QL06p046039]
6 46038166 46040164 v3 Quercus lobata (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Qlobata_QL06p046039:mrna
QL06p046039:mrna
High No 1387 [1]
Coding potential...
Type: noncoding Potential: -1.040
Folding energies...
MFEI: -21.788 AMFE: -0.547
GC content
%: 39.798


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Qlobata_QL06p046039.png