Rchinensis RchiOBHm CPg0502481

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Rchinensis_RchiOBHm_CPg0502481
[ RchiOBHm_CPg0502481]
Pt 103380 104503 v2 Rosa chinensis (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Rchinensis_PRQ15722
PRQ15722
High No 1080 OG0305815
Coding potential...
Type: noncoding Potential: -1.313
Folding energies...
MFEI: -21.806 AMFE: -0.725
GC content
%: 30.093


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Rchinensis_RchiOBHm_CPg0502481.png