Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Rchinensis_RchiOBHm_Chr1g0313391 [ RchiOBHm_Chr1g0313391] |
1 | 470741 | 470972 | v2 | Rosa chinensis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Rchinensis_PRQ54421 PRQ54421 |
Low | No | 232 | OG0057794 | Get ORF Coding potential... Type: noncoding Potential: -0.828 Folding energies... MFEI: -25.690 AMFE: -0.701 GC content %: 36.638 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Rchinensis_PRQ54421 | SwissProt | 2021-04-01 | F4K4E3 | 4.72e-6 |