Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Sbicolor_Sobic.009G092800 [ Sobic.009G092800] |
Chr09 | 22108436 | 22110236 | v3.1.1 | Sorghum bicolor (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Sbicolor_Sobic.009G092800.1 Sobic.009G092800.1 |
High | No | 678 | OG0004407 | Get ORF Coding potential... Type: noncoding Potential: -1.236 Folding energies... MFEI: -27.891 AMFE: -0.555 GC content %: 50.295 | |
Sbicolor_Sobic.009G092800.2 Sobic.009G092800.2 |
High | No | 1405 | OG0004407 | Get ORF Coding potential... Type: noncoding Potential: -1.200 Folding energies... MFEI: -24.548 AMFE: -0.597 GC content %: 41.139 | |
Sbicolor_Sobic.009G092800.3 Sobic.009G092800.3 |
High | No | 1291 | OG0004407 | Get ORF Coding potential... Type: noncoding Potential: -1.281 Folding energies... MFEI: -24.260 AMFE: -0.598 GC content %: 40.589 | |
Sbicolor_Sobic.009G092800.4 Sobic.009G092800.4 |
High | No | 551 | OG0004407 | Get ORF Coding potential... Type: noncoding Potential: -1.152 Folding energies... MFEI: -27.260 AMFE: -0.527 GC content %: 51.724 |