Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMG400011323 [ PGSC0003DMG400011323] |
ST4.03ch01 | 58072193 | 58072504 | v4.03 | Solanum tuberosum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMT400029446 PGSC0003DMT400029446 |
Low | No | 312 | OG0334043 | Get ORF Coding potential... Type: noncoding Potential: -0.255 Folding energies... MFEI: -27.404 AMFE: -0.658 GC content %: 41.667 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Stuberosum_PGSC0003DMT400029446 | SwissProt | 2021-04-01 | Q8W453 | 4.04e-21 |