Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC1AG002720 [ TRIDC1AG002720] |
1A | 11192281 | 11193915 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC1AG002720.1 TRIDC1AG002720.1 |
High | No | 1129 | OG0009329 | Get ORF Coding potential... Type: noncoding Potential: -1.172 Folding energies... MFEI: -35.226 AMFE: -0.655 GC content %: 53.764 | |
Tdicoccoides_TRIDC1AG002720.2 TRIDC1AG002720.2 |
High | No | 1252 | OG0009329 | Get ORF Coding potential... Type: noncoding Potential: -1.035 Folding energies... MFEI: -35.735 AMFE: -0.668 GC content %: 53.514 | |
Tdicoccoides_TRIDC1AG002720.3 TRIDC1AG002720.3 |
High | No | 1000 | OG0009329 | Get ORF Coding potential... Type: noncoding Potential: -1.223 Folding energies... MFEI: -33.110 AMFE: -0.631 GC content %: 52.500 | |
Tdicoccoides_TRIDC1AG002720.4 TRIDC1AG002720.4 |
High | No | 866 | OG0009329 | Get ORF Coding potential... Type: noncoding Potential: -0.962 Folding energies... MFEI: -32.991 AMFE: -0.622 GC content %: 53.002 |